BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E02LP1|AL429576
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1172 1690 0.0
>3x_Contig1172
Length = 5407
Score = 1690 bits (852), Expect = 0.0
Identities = 883/893 (98%), Gaps = 1/893 (0%)
Strand = Plus / Minus
Query: 1 gatcaccattgtttatgccaaggggcatagcgtaattgtattgcctgtgatgctttatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 gatcaccattgtttatgccaaggggcatagcgtaattgtattgcctgtgatgctttatca 2367
Query: 61 acggctgctttgtgtcttgtgcctttttttcgtggactcgaagactggaaatcttaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 acggctgctttgtgtcttgtgcctttttttcgtggactcgaagactggaaatcttaaatc 2307
Query: 121 acgtgatagatgaaggaccagggaaataaactgtcgcgcgtyaccggacacaattaactc 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2306 acgtgatagatgaaggaccagggaaataaactgtcgcgcgtcaccggacacaattaactc 2247
Query: 181 gaatggaaatatacattcgccagagcacagtattataccatgttcgatgcatctttgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 gaatggaaatatacattcgccagagcacagtattataccatgttcgatgcatctttgtac 2187
Query: 241 aatatttttaccaatatttcataacaagactattgtaatgtcttgctactagtagcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 aatatttttaccaatatttcataacaagactattgtaatgtcttgctactagtagcaaca 2127
Query: 301 tataacagacaaaggggaccttccctaattacaaaccaaattatctctctcatttttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 tataacagacaaaggggaccttccctaattacaaaccaaattatctctctcatttttttt 2067
Query: 361 gctggttctctcatcaaatccattgcttcgctatccatatagtcacctacgttggccttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 gctggttctctcatcaaatccattgcttcgctatccatatagtcacctacgttggccttt 2007
Query: 421 cccatcgctgtttgacttgtttattctctctttttctttacatgtcttcattgcagtata 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 cccatcgctgtttgacttggttattctctctttttctttacatgtcttcattgcagtata 1947
Query: 481 acttagcaagtcctatcgagtttctaacacggtttttcgatcgaaagatcaacgattctg 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 acttagcaagtnctatcgagtttctaacacggtttttcgatcgaaagatcaacgattctg 1887
Query: 541 ttgatattgtcgaagaaaccccggaagatgttcagaggagatacttgtttatggaattta 600
|||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1886 ttgatattgtcggaagaaccccggaagatgttcagaggagatacttgtttatgggattta 1827
Query: 601 tcagctcggagaccgagtatttagagatgttgaaactttttgaacacacgtatttggcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 tcagctcggagaccgagtatttagagatgttgaaactttttgaacacacgtatttggcaa 1767
Query: 661 cactcaacaaatctgatcatatcgcatggcaaatgactttccgagtggt-ccaaaatcta 719
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1766 cactcaacaaatctgatcatatcgcatggcaaatgactttccgagtggtcccaaaatcta 1707
Query: 720 gttaagggacacgagaaattgctagaacaggttttcggttggctagagttgcccatttca 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1706 gttaagggacacgagaaattgctagaacaggttttcggttggctagagttgccccattca 1647
Query: 780 actgatgataataaagcagaaatcaattgggaactccatgcttcccatataggcaacaag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 actgatgataataaagcagaaatcaattgggaactccatgcttcccatataggcaacaag 1587
Query: 840 ttccagtctttgaattctttgtccaattttatccaagtatatgtcgaaaaatt 892
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 ttccagtctttgaattctttgtccaattttatccaagtatatgtcgaaaaatt 1534
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6863
Number of Sequences: 1807
Number of extensions: 6863
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)